Mport machinery, as long as the critical inbalance between the charge distribution on both faces of the helix remains established.Importance of the R-like Recognition Sequence for 79831-76-8 web mitochondrial Targeting and ProcessingThe dynamin B presequence does not contain unambiguous R2, R-3 or R-10 sequence motif. However, an R-like recognition sequence between residues 103?12 is present, which may contain an MPP cleavage site and participate in MIP cleavage (Fig. 1A). Additionally, there may be several potential R-none sites. To understand the role of processing sites in protein localization and maturation, we generated EYFP constructs NTS RS and NTS DI2 RS lacking the R-like recognition site. Additionally, we generated constructs NTS 105A and NTS DI2 105A, mutating the arginine residue from the putative cleavage site to 25033180 alanine. Introduction of mutation R105A and deletion of the R-like 
recognition sequence in the full-length background do not interfere significantly with proper targeting and processing of the protein (Fig. 5A and Fig. S2D ). However, removal or perturbation of the cleavage site leads to an almost complete loss of mitochondrial targeting and processing in the context of the NTS DI2 construct (Fig. 5). Construct NTS DI2 DRS is poorly processed and not targeted, while construct NTS DI2 R105A is processed similar poorly but targeted with reasonable efficiency. These results suggest the presence of one or more additional processing sites that are affected by the removal of the RS-region. The presence of additional R-none MPP cleavage sites within the presequence can provide added flexibility to the processing machinery during mitochondrial import.The Dynamin B Presequence Functions as an MTS in Mammalian CellIn order to determine whether the unusual dynamin B presequence can serve as mammalian mitochondrial targeting sequence, we generated mammalian expression vectors where the dynamin B presequence or sequences derived from it are fused to the N-terminus of EGFP. Transfection of the NTS-EGFP construct into HEK293T cells results in the production, mitochondrial targeting, and proteolytic processesing of the protein. Confocal images show that the NTS-EGFP signal is surrounded by the fluorescence signal from the outer membrane protein Tom20, indicating that the protein is targeted to an inner mitochondrial compartment. This result is further supported by protease accessibility experiments. Here, the outer mitochondrial membrane marker Tom20 is digested, while the processed GFP construct is 1326631 apparently protected from degradation due to its location in the mitochondrial matrix protected. Control experiment using detergent-permeabilized mitochondria show that the processed GFP construct is degraded when 47931-85-1 site direct contact with trypsin is established (Fig. 6A ). The TIM complex-dependent import of proteins into the mitochondrial matrix requires energy provided by the mitochondrial inner membrane potential DYm, whereas proteins targeted to the other mitochondrial compartments do not [3]. To test whether the transport of NTS-tagged proteins to the mitochondrial matrix is DYm-dependent, we over-expressed NTS-EGFP in HEK293Tcells. Transformed cells that were treated with the H+ -ionophore CCCP showed a marked increase in the ratio of cytoplasmic to mitochondrial matrix localization of the NTS-EGFP construct compared to an untreated control. This observation provides support for the concept that the translocation of NTS-EGFP to the mitochondrial mat.Mport machinery, as long as the critical inbalance between the charge distribution on both faces of the helix remains established.Importance of the R-like Recognition Sequence for Mitochondrial Targeting and ProcessingThe dynamin B presequence does not contain unambiguous R2, R-3 or R-10 sequence motif. However, an R-like recognition sequence between residues 103?12 is present, which may contain an MPP cleavage site and participate in MIP cleavage (Fig. 1A). Additionally, there may be several potential R-none sites. To understand the role of processing sites in protein localization and maturation, we generated EYFP constructs NTS RS and NTS DI2 RS lacking the R-like recognition site. Additionally, we generated constructs NTS 105A and NTS DI2 105A, mutating the arginine residue from the putative cleavage site to 25033180 alanine. Introduction of mutation R105A and deletion of the R-like recognition sequence in the full-length background do not interfere significantly with proper targeting and processing of the protein (Fig. 5A and Fig. S2D ). However, removal or perturbation of the cleavage site leads to an almost complete loss of mitochondrial targeting and processing in the context of the NTS DI2 construct (Fig. 5). 
Construct NTS DI2 DRS is poorly processed and not targeted, while construct NTS DI2 R105A is processed similar poorly but targeted with reasonable efficiency. These results suggest the presence of one or more additional processing sites that are affected by the removal of the RS-region. The presence of additional R-none MPP cleavage sites within the presequence can provide added flexibility to the processing machinery during mitochondrial import.The Dynamin B Presequence Functions as an MTS in Mammalian CellIn order to determine whether the unusual dynamin B presequence can serve as mammalian mitochondrial targeting sequence, we generated mammalian expression vectors where the dynamin B presequence or sequences derived from it are fused to the N-terminus of EGFP. Transfection of the NTS-EGFP construct into HEK293T cells results in the production, mitochondrial targeting, and proteolytic processesing of the protein. Confocal images show that the NTS-EGFP signal is surrounded by the fluorescence signal from the outer membrane protein Tom20, indicating that the protein is targeted to an inner mitochondrial compartment. This result is further supported by protease accessibility experiments. Here, the outer mitochondrial membrane marker Tom20 is digested, while the processed GFP construct is 1326631 apparently protected from degradation due to its location in the mitochondrial matrix protected. Control experiment using detergent-permeabilized mitochondria show that the processed GFP construct is degraded when direct contact with trypsin is established (Fig. 6A ). The TIM complex-dependent import of proteins into the mitochondrial matrix requires energy provided by the mitochondrial inner membrane potential DYm, whereas proteins targeted to the other mitochondrial compartments do not [3]. To test whether the transport of NTS-tagged proteins to the mitochondrial matrix is DYm-dependent, we over-expressed NTS-EGFP in HEK293Tcells. Transformed cells that were treated with the H+ -ionophore CCCP showed a marked increase in the ratio of cytoplasmic to mitochondrial matrix localization of the NTS-EGFP construct compared to an untreated control. This observation provides support for the concept that the translocation of NTS-EGFP to the mitochondrial mat.